BLAST Web Interface for
Actinomycetales
genome data
Your visit is
46409
times.
Target:
S. avermitilis (Protein)
S. coelicolor A3(2) (Protein)
S. griseus IFO13350 (Protein)
S. ambofaciens ATCC 23877 (Protein)
S. lividans TK24 (Protein)
S. albus J1074 (Protein)
S. scabies 87.22 (Protein)
S. clavuligerus ATCC 27064 (Protein)
S. parvulus ATCC 2297 (Protein)
S. venezuelae ATCC 10712 (Protein)
S. kanamyceticus ATCC 12853 (Protein)
S. fradiae ATCC 10745 (Protein)
S. davawensis JCM 4913 (Protein)
Kitasatospora setae KM-6054 (Protein)
Saccharopolyspora erythraea NRRL2338 (Protein)
S. avermitilis plasmid SAP1 (Protein)
S. coelicolor A3(2) plasmid SCP1 (Protein)
S. clavuligerus ATCC 27064 plasmid pSCL4 (Protein)
S. coelicolor A3(2) plasmid SCP2 (Protein)
Bacteriophage phiC31 (Protein)
Bacteriophage phiBT1 (Protein)
Bacteriophage TG1 (Protein)
S. avermitilis (DNA)
S. coelicolor A3(2) (DNA)
S. griseus IFO13350 (DNA)
S. ambofaciens ATCC 23877 (DNA)
S. lividans TK24 (DNA)
S. albus J1074 (DNA)
S. scabies 87.22 (DNA)
S. clavuligerus ATCC 27064 (DNA)
S. parvulus ATCC 2297 (DNA)
S. venezuelae ATCC 10712 (DNA)
S. kanamyceticus ATCC 12853 (DNA)
S. fradiae ATCC 10745
S. davawensis JCM 4913 (DNA)
Kitasatospora setae KM-6054 (DNA)
Saccharopolyspora erythraea NRRL2338 (DNA)
S. avermitilis plasmid SAP1 (DNA)
S. coelicolor A3(2) plasmid SCP1 (DNA)
S. clavuligerus ATCC 27064 plasmid pSCL4 (DNA)
S. coelicolor A3(2) plasmid SCP2 (DNA)
Bacteriophage phiC31 (DNA)
Bacteriophage phiBT1 (DNA)
Bacteriophage TG1 (DNA)
Program:
BLASTP (Protein vs Protein)
BLASTN (DNA vs DNA)
BLASTX (DNA vs Protein)
BLASTP (Protein vs Protein)
TBLASTN (Protein vs DNA)
Query (should be FASTA format):
Filter low-complexity region
Expectation value (E)
0.1
0.0001
0.001
0.01
0.1
1
10
100
1000
Number of one-line descriptions to show
5
10
25
50
100
Number of alignments to show
5
10
25
50
100
Graphical overview.
Sort by
score
position
Scoring matrix
default
BLOSUM45
BLOSUM62
BLOSUM80
PAM30
PAM70
Query Genetic Codes (blastx only)
default
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
DB Genetic Codes (tblast[nx] only)
default
Standard (1)
Vertebrate Mitochondrial (2)
Yeast Mitochondrial (3)
Mold Mitochondrial; ... (4)
Invertebrate Mitochondrial (5)
Ciliate Nuclear; ... (6)
Echinoderm Mitochondrial (9)
Euplotid Nuclear (10)
Bacterial (11)
Alternative Yeast Nuclear (12)
Ascidian Mitochondrial (13)
Flatworm Mitochondrial (14)
Blepharisma Macronuclear (15)
Other database
Actinobacteria
|
Cosmid libraries
Maintained by
Haruo IKEDA <
[email protected]
>
NCBI BLAST Home Page
Access list
BLAST 2 sequences